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Bioengineering
Baskin School of Engineering
335 Baskin Engineering Building
(831) 459-2158
http://www.soe.ucsc.edu
Program Description | Changes
to 2009-10 Catalog Highlighted | Faculty
Participating
Faculty and Professional Interests
Mark Akeson (Biomolecular Engineering)
Undergraduate Director, Bioengineering
DNA structure and dynamics, single molecule biophysics, bioethics
Manuel Ares Jr. (Molecular, Cell, and Developmental Biology)
RNA processing, structure and function of RNA
Phillip Berman (Biomolecular Engineering, Department Chair)
Drug development, vaccines, AIDS, monoclonal antibody therapeutics,
immunology, molecular cell/biology, recombinant protein production (commercial
scale)
David Deamer (Biomolecular Engineering and Chemistry and Biochemistry; UC
Davis Emeritus)
Membrane biophysics, nanopore analysis, DNA sequencing, biomolecular
self-assembly
David Draper (Applied Mathematics and Statistics)
Bayesian statistics, hierarchical modeling, Bayesian nonparametric
methods, model specification and model uncertainty, quality assessment, risk
assessment, statistical applications in the environmental, medical, and social
sciences
William Dunbar (Computer Engineering)
Theory and application of feedback control; air traffic control;
nanopore sensors, dynamics and control of biomolecules
Camilla Forsberg (Biomolecular Engineering)
Hematopoietic stem cells, transcriptional regulation, chromatin,
blood cell development, cell surface receptors, genomics
Dietlind L. Gerloff (Biomolecular Engineering)
Protein to protein interactions, protein function prediction,
functional genomics, protein structure prediction
Alexander A. Grillo (SCIPP)
Neurophysiology, neural systems, high-energy particle physics
Grant Hartzog (Molecular, Cell, and Developmental Biology)
Biochemistry, genetics, chromatin and transcriptional regulation
David Haussler (Biomolecular Engineering; Distinguished Professor of Biomolecular
Engineering; Investigator, Howard Hughes Medical Institute; Director, Center
for Biomolecular Science and Engineering; Scientific Co-Director, California
Institute for Quantitative Biosciences [QB3])
Molecular evolution, neurodevelopment, genomics, bioinformatics,
computational molecular biology, statistical models, machine learning, neural
networks
Richard Hughey (Biomolecular Engineering and Computer Engineering)
(Chair, B.S. in Bioengineering)
Computer architecture, parallel processing, computational
biology
Michael Isaacson (Electrical Engineering)
Nano- and microfabrication technology and applications to
biomedical and diagnostic devices, nanocharacterization of materials with
emphasis on the development of microscopy tools, novel modes of imaging, electron
and light optics
Kevin Karplus (Biomolecular Engineering)
Protein structure prediction, protein design
Douglas Kellogg (Molecular, Cell, and Developmental Biology)
Coordination of cell growth and cell division
Joel Kubby (Electrical Engineering)
Micro-Electro-Mechanical-Systems (MEMS), adaptive optics
(AO), optical-MEMS, bio-MEMS, bio-imaging, AO microscopy
Sri Kurniawan (Computer Engineering)
Human-computer interaction; human factors and ergonomics;
accessibility; assistive technology; usability; empirical studies; user-centered
design
Alan M. Litke (SCIPP)
Neural systems; retinal processing; development and prosthesis;
technology development for neurophysiology; high-energy physics
Wentai Liu (Electrical Engineering)
Retinal prosthesis, biomimetic systems, integrated neuro-electronics,
molecular electronics, CMOS and SOI transceiver design, current mode band
limited signaling, microelectronic sensor, timing/clock recovery and optimization,
noise characterization and modeling, and computer vision/image processing
Todd Lowe (Biomolecular Engineering)
Experimental and computation genomics, ncRNA gene finders,
DNA microarrays to study the biology of Archaea
Roberto Manduchi (Computer Engineering)
Sensor processing and image analysis with application to
assistive technology and environmental modeling
Dominic W. Massaro (Psychology, Emeritus)
Understanding language, speech perception and reading, language
learning and speech technology, pattern recognition, psychology of interactive
media, psychology of art and new media, human-machine interface
Glenn L. Millhauser (Chemistry and Biochemistry)
Electron spin resonance; nuclear magnetic resonance, melanocortin
receptor signaling, agouti proteins, prions, peptide synthesis
Linda Ogren (Molecular, Cellular, and Developmental Biology)
Endocrinology
Nader Pourmand (Biomolecular Engineering)
Biosensors, microarray, nanotechnology, pathogens, sequencing,
genotyping, DNA fingerprinting
Raquel Prado (Applied Mathematics and Statistics)
Bayesian non-stationary time series modeling, multivariate
time series, biomedical signal processing and statistical genetics
Jacob Rosen (Computer Engineering)
Biorobotics; human-centered robotics; medical robotics; surgery
and rehabilitation; wearable robotics (exoskeleton); teleoperation, haptics
and virtual reality, biomechanics, neuromuscular control and human-machine
interfaces
Wendy Rothwell (Biomolecular Engineering)
Biotechnology, molecular genetics
Holger Schmidt (Electrical Engineering)
Integrated optics for biomedicine and quantum optics, nano-magneto-optics,
single-particle spectroscopy, ultrafast optics
Andrea Steiner (Community Studies and Molecular, Cellular, and Developmental
Biology)
Health-care systems, health justice, critical public health,
gerontology, ageism, long-term care
Joshua Stuart (Biomolecular Engineering)
Computational functional genomics, comparative analysis of
gene regulation, cross-species inference of gene networks, probabilistic graphical
models
Ellen Kappy Suckiel (Philosophy)
Ethics, William James, American philosophy, genetic ethics,
ethics of biotechnology
John Tamkun (Molecular, Cell, and Developmental Biology)
Transcriptional regulation, molecular genetics of Drosophila
development, regulation of gene expression
John F. Vesecky (Electrical Engineering)
HF radar design and construction and observation of ocean
surface winds, waves and currents with applications to coastal and deep water
ocean processes; project MEDSAT
Alan M. Zahler (Molecular, Cell, and Developmental Biology)
Molecular biology, splice site selection, and alternative
pre-mRNA processing
Jin Z. Zhang (Chemistry and Biochemistry)
Design, synthesis, characterization, and application of nanomaterials,
including semiconductor and metal nanoparticles; femtosecond laser spectroscopy;
ultrafast dynamics on surfaces and at interfaces; cancer biomarker detection;
surface-enhanced Raman spectroscopy
Yi Zuo (Molecular,
Cell, and Developmental Biology)
Glia-synapse interaction and synaptic plasticity in vivo
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