UCSC logo catalog update 2009-2010
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UCSC General Catalog

Bioengineering

Baskin School of Engineering
335 Baskin Engineering Building
(831) 459-2158
http://www.soe.ucsc.edu


Program Description | Changes to 2009-10 Catalog Highlighted | Faculty

Participating Faculty and Professional Interests

Mark Akeson (Biomolecular Engineering)
Undergraduate Director, Bioengineering
DNA structure and dynamics, single molecule biophysics, bioethics

Manuel Ares Jr. (Molecular, Cell, and Developmental Biology)
RNA processing, structure and function of RNA

Phillip Berman (Biomolecular Engineering, Department Chair)
Drug development, vaccines, AIDS, monoclonal antibody therapeutics, immunology, molecular cell/biology, recombinant protein production (commercial scale)

David Deamer (Biomolecular Engineering and Chemistry and Biochemistry; UC Davis Emeritus)
Membrane biophysics, nanopore analysis, DNA sequencing, biomolecular self-assembly

David Draper (Applied Mathematics and Statistics)
Bayesian statistics, hierarchical modeling, Bayesian nonparametric methods, model specification and model uncertainty, quality assessment, risk assessment, statistical applications in the environmental, medical, and social sciences

William Dunbar (Computer Engineering)
Theory and application of feedback control; air traffic control; nanopore sensors, dynamics and control of biomolecules

Camilla Forsberg (Biomolecular Engineering)
Hematopoietic stem cells, transcriptional regulation, chromatin, blood cell development, cell surface receptors, genomics

Dietlind L. Gerloff (Biomolecular Engineering)
Protein to protein interactions, protein function prediction, functional genomics, protein structure prediction

Alexander A. Grillo (SCIPP)
Neurophysiology, neural systems, high-energy particle physics

Grant Hartzog (Molecular, Cell, and Developmental Biology)
Biochemistry, genetics, chromatin and transcriptional regulation

David Haussler (Biomolecular Engineering; Distinguished Professor of Biomolecular Engineering; Investigator, Howard Hughes Medical Institute; Director, Center for Biomolecular Science and Engineering; Scientific Co-Director, California Institute for Quantitative Biosciences [QB3])
Molecular evolution, neurodevelopment, genomics, bioinformatics, computational molecular biology, statistical models, machine learning, neural networks

Richard Hughey (Biomolecular Engineering and Computer Engineering)
(Chair, B.S. in Bioengineering)
Computer architecture, parallel processing, computational biology

Michael Isaacson (Electrical Engineering)
Nano- and microfabrication technology and applications to biomedical and diagnostic devices, nanocharacterization of materials with emphasis on the development of microscopy tools, novel modes of imaging, electron and light optics

Kevin Karplus (Biomolecular Engineering)
Protein structure prediction, protein design

Douglas Kellogg (Molecular, Cell, and Developmental Biology)
Coordination of cell growth and cell division

Joel Kubby (Electrical Engineering)
Micro-Electro-Mechanical-Systems (MEMS), adaptive optics (AO), optical-MEMS, bio-MEMS, bio-imaging, AO microscopy

Sri Kurniawan (Computer Engineering)
Human-computer interaction; human factors and ergonomics; accessibility; assistive technology; usability; empirical studies; user-centered design

Alan M. Litke (SCIPP)
Neural systems; retinal processing; development and prosthesis; technology development for neurophysiology; high-energy physics

Wentai Liu (Electrical Engineering)
Retinal prosthesis, biomimetic systems, integrated neuro-electronics, molecular electronics, CMOS and SOI transceiver design, current mode band limited signaling, microelectronic sensor, timing/clock recovery and optimization, noise characterization and modeling, and computer vision/image processing

Todd Lowe (Biomolecular Engineering)
Experimental and computation genomics, ncRNA gene finders, DNA microarrays to study the biology of Archaea

Roberto Manduchi (Computer Engineering)
Sensor processing and image analysis with application to assistive technology and environmental modeling

Dominic W. Massaro (Psychology, Emeritus)
Understanding language, speech perception and reading, language learning and speech technology, pattern recognition, psychology of interactive media, psychology of art and new media, human-machine interface

Glenn L. Millhauser (Chemistry and Biochemistry)
Electron spin resonance; nuclear magnetic resonance, melanocortin receptor signaling, agouti proteins, prions, peptide synthesis

Linda Ogren (Molecular, Cellular, and Developmental Biology)
Endocrinology

Nader Pourmand (Biomolecular Engineering)
Biosensors, microarray, nanotechnology, pathogens, sequencing, genotyping, DNA fingerprinting

Raquel Prado (Applied Mathematics and Statistics)
Bayesian non-stationary time series modeling, multivariate time series, biomedical signal processing and statistical genetics

Jacob Rosen (Computer Engineering)
Biorobotics; human-centered robotics; medical robotics; surgery and rehabilitation; wearable robotics (exoskeleton); teleoperation, haptics and virtual reality, biomechanics, neuromuscular control and human-machine interfaces

Wendy Rothwell (Biomolecular Engineering)
Biotechnology, molecular genetics

Holger Schmidt (Electrical Engineering)
Integrated optics for biomedicine and quantum optics, nano-magneto-optics, single-particle spectroscopy, ultrafast optics

Andrea Steiner (Community Studies and Molecular, Cellular, and Developmental Biology)
Health-care systems, health justice, critical public health, gerontology, ageism, long-term care

Joshua Stuart (Biomolecular Engineering)
Computational functional genomics, comparative analysis of gene regulation, cross-species inference of gene networks, probabilistic graphical models

Ellen Kappy Suckiel (Philosophy)
Ethics, William James, American philosophy, genetic ethics, ethics of biotechnology

John Tamkun (Molecular, Cell, and Developmental Biology)
Transcriptional regulation, molecular genetics of Drosophila development, regulation of gene expression

John F. Vesecky (Electrical Engineering)
HF radar design and construction and observation of ocean surface winds, waves and currents with applications to coastal and deep water ocean processes; project MEDSAT

Alan M. Zahler (Molecular, Cell, and Developmental Biology)
Molecular biology, splice site selection, and alternative pre-mRNA processing

Jin Z. Zhang (Chemistry and Biochemistry)
Design, synthesis, characterization, and application of nanomaterials, including semiconductor and metal nanoparticles; femtosecond laser spectroscopy; ultrafast dynamics on surfaces and at interfaces; cancer biomarker detection; surface-enhanced Raman spectroscopy

Yi Zuo (Molecular, Cell, and Developmental Biology)
Glia-synapse interaction and synaptic plasticity in vivo