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Chemistry and Biochemistry

389 Thimann Laboratories
(831)459-4125
http://chemistry.ucsc.edu
Program Description
| Faculty | Course
Descriptions
Chemistry occupies a key position in the modern sciences.
Ultimately, most phenomena in biology, medicine, geology, and the
environmental sciences can be described in terms of the chemical
and physical behavior of atoms and molecules. Because of the wide
appeal and utility of chemistry, UC Santa Cruz offers many lower-division
courses, differing in emphasis and style, which meet diverse needs.
Students should also note the numerous upper-division course offerings
and select those most suitable to their academic interests. The
curriculum in chemistry exposes the student to the principal areas
of modern chemistry, including organic, inorganic, physical analytical,
and biochemistry. The curriculum is designed to meet the needs of
students who plan to end their formal education with a bachelor
of arts or bachelor of science degree, as well as those who wish
to go on for an advanced degree. The UC Santa Cruz chemistry B.A.
or B.S. graduate is well prepared to pursue a career in chemistry
or an allied field.
Research in chemistry at UC Santa Cruz is closely interwoven with
graduate and undergraduate education. The chemistry and biochemistry
program is active at the graduate level, and the faculty also encourages
undergraduates to become involved in research. Research work is
done for academic credit in courses 180A-B-C, Senior Research;
or in course 199, Tutorial. There are also opportunities
for interdisciplinary research spanning, for example, chemistry/physics,
chemistry/geology, chemistry/oceanography, chemistry/biology, and
chemistry/ computer science. It is not uncommon for students to
see their own original work published in research journals.
Chemistry and biochemistry faculty and approximately 80 graduate
students and 30 postdoctoral fellows are housed in two well-equipped
buildings near the Science Library. Standard and specialized spectrophotometric
equipment, a number of instruments devoted to structural studies,
instrumentation for specialized analytical purposes, and computer
facilities used in studies of structure and reactivity are all available.
The Science Library has an excellent collection of current journals,
in print and electronic form, and reference works, as well as earlier
volumes of all the major journals going back several decades. Additional
source material can be readily and rapidly obtained on interlibrary
loan.
A degree in chemistry opens the door to a wide variety of academic
careers. Some UC Santa Cruz graduates are working as researchers
in industry in areas such as electronic materials, biotechnology,
medicinal chemistry, and petrochemicals. Others have entered government
service, as research chemists in the Food and Drug Administration,
the Environmental Protection Agency, or law enforcement crime laboratories.
Fields such as patent law, commercial development, and scientific
writing are open to graduates. Many chemistry majors go on to university
graduate programs across the nation to prepare for careers in research,
teaching, or a combination of the two. The degree in chemistry also
provides a strong disciplinary background in preparation for a career
in the important and much needed area of science teaching in high
school. A major in chemistry is also an excellent beginning for
one of the many opportunities in the health sciences.
The UC Santa Cruz Chemistry and Biochemistry Department offers
both B.S. and B.A. degree programs. The B.S. program has more requirements,
and a student in this program earns a degree that meets the requirements
of an American Chemical Society certified program. The B.S. degree
should be the choice if a student is interested in getting a job
in chemistry immediately after receiving his or her college degree.
The B.S. program also provides a good background for graduate work
in chemistry. The B.A. program has fewer requirements and should
be considered by students who wish to take more science courses
outside of chemistry to enter an interdisciplinary area. Examples
might be chemical oceanography, geochemistry, chemical physics,
environmental chemistry, and health sciences. The B.A. might also
be a good choice for students who wish to become high school teachers.
However, for either degree, the courses stress the fundamentals
of chemistry and allow students to pursue independent research.
In addition to its regular course offerings for majors,
the Chemistry and Biochemistry Department offers several courses
for the nonmajor. These include 80A, Chemistry of Nutrition:
Concepts and Controversy; 80G, Bioethics in the Twenty-First
Century: Science, Business, and Society; and 80H, Introduction
to Wines and Wine Chemistry. These courses are taught by chemistry
faculty and are designed to present various aspects of chemical
science to the nonmajor. A minor in chemistry is also offered for
those who wish to have a strong complementary program in chemistry
while majoring in another course of study.
The requirements for the bachelor of arts in chemistry
have been kept to a minimum so that students may tailor their program
to their own purposes, for example, to pursue a double major, to
study areas of the humanities or social sciences, to complete major
requirements late in their college career, or to concentrate study
in a specific branch of chemistry. The minimum requirements (including
prerequisites) constitute 54 percent of a student’s total undergraduate
program; consequently, there is ample time to explore and discover
other interests within the university. In order to plan wisely,
students are advised to refer to each course description for a detailed
listing of prerequisites. Students who decide they want a professional
career in chemistry are advised to meet with the chemistry undergraduate
staff adviser.
Lower-Division Requirements
Chemistry 1B/M and 1C/N
Mathematics 11A-B and 22 or 19A-B and 22
Physics 5A/L, 5B/M, and 5C/N; or 6A/L, 6B/M,
and 6C/N
Upper-Division Requirements
Chemistry 108A/L and 108B/M; or 112A/L, 112B/M, and 112C/N
Chemistry 151A/L, 163A, 163B, 164A, 164B, and one of the following:
146A, 146B, 146C, 146D
Elective(s). At least
two if 108A/L and 108B/M are taken; or at least one if 112A/L, 112B/M,
and 112C/N are taken from the following list:
Chemistry 103 (can be used as elective only if Biochemistry and
Molecular Biology 100A, 100B, and 100C are not taken as electives)
Chemistry 122, 143, 151B, 163C, and graduate-level lecture courses
in chemistry
Biochemistry and Molecular Biology 100A, 100B, 100C
Computer Science 12A or 60N
Environmental Toxicology 135
Ocean Sciences 120
Physics 110A-B, 116A-B-C
Comprehensive Requirement.
There are two options for satisfying this requirement:
Senior thesis. A senior research
project based on original experimental or theoretical research (courses
180A-B-C). At the conclusion of the project, the student submits
a satisfactory formal research paper to the faculty sponsor. Students
arrange for a faculty sponsor by consulting with a relevant faculty
member within the chemistry or the biochemistry and molecular biology
major program. In some cases, faculty outside of these major programs
(for example, in biology, ocean sciences, or Earth sciences) may
be an appropriate sponsor. Students who select a sponsor outside
the chemistry or the biochemistry and molecular biology major programs
should have the title and description of the proposed thesis reviewed
by the undergraduate adviser in the Department of Chemistry and
Biochemistry. Students, usually working in the laboratory of the
faculty sponsor, acquire experimental and/or theoretical research
experience and skills in the laboratory as well as instruction in
the writing of a research paper. Students are expected to make satisfactory
academic progress and be in good academic standing while they take
180 courses;
Senior essay. An essay based
on literature research (course 199). After agreeing in advance on
an appropriate topic of interest and a format, the student submits
a satisfactory essay on the topic. Students arrange for a faculty
sponsor by consulting with a relevant faculty member within the
chemistry or the biochemistry and molecular biology major program.
In some cases, faculty outside of these major programs (for example,
in biology, ocean sciences, or Earth sciences) may be an appropriate
sponsor. Students who select a sponsor outside the chemistry or
the biochemistry and molecular biology major programs should have
the title and description of the proposed essay reviewed by the
undergraduate adviser in the Department of Chemistry and Biochemistry.
Students acquire experience and skills in scientific literature
research as well as in the writing of a research paper.
The following is the recommended academic plan for students
to complete during their first two years as preparation for the
B.A. degree.
|
Year
|
Fall
|
Winter
|
Spring
|
|
1st
(frsh)
|
Chem 1A
Math 11A
|
Chem 1B/M
Math 11B
|
Chem 1C/N
Math 22
|
2nd
(soph) |
Chem 112A/L or
Chem 108A/L
Phys 6A/L
|
Chem 112B/M or
Chem 108B/M or
Chem 108A/L
Phys 6B/M
|
Chem 112C/N
Chem 108B/M
Phys 6C/N
|
The bachelor of science major program is designed for
students who intend to pursue a professional career in chemistry.
It is rigorous and broadly based, appropriate to that purpose. The
course requirements for the B.S. major are as follows; please refer
to each course description for a detailed listing of prerequisites.
Lower-Division Requirements
Chemistry 1B/M and 1C/N
Mathematics 19A-B, 22
Physics 5A/L, 5B/M, and 5C/N; or 6A/L, 6B/M,
and 6C/N
Upper-Division Requirements
Chemistry 112A/L, 112B/M, and 112C/N; or 108A/L, 108B/M, and 143
Chemistry 103
Chemistry 151A/L, 163A, 163B, 163C, 164A, 164B, and one of the
following: 146A, 146B, 146C, 146D
Electives. At least two from
the following list (to receive certification from the American Chemical
Society, you must complete Chemistry 122 as one of the two electives):
Chemistry 122, 143 (if not taken for the organic chemistry requirement),
151B, graduate-level lecture courses in chemistry (5 credits or
two 3-credit lecture courses)
Biochemistry and Molecular Biology 100A, 100B, 100C (can substitute
for Chemistry 103)
Biology/Environmental Toxicology 134
Computer Science 12A or 60N
Environmental Toxicology 135
Ocean Sciences 120
Physics 110A-B, 116A-B-C
Comprehensive Requirement:
same as for the B.A.
(see above)
B.S. Degree with Biochemistry Emphasis.
The biochemistry pathway is designed for students who intend to
pursue a career in biochemistry or in a related field such as biotechnology,
and it provides an exceptionally rigorous chemistry emphasis.
Chemistry 1B/M and 1C/N
Mathematics 19A-B, 22
Physics 5A/L, 5B/M, and 5C/N; or 6A/L, 6B/M,
and 6C/N
Chemistry 112A/L, 112B/M, and 112C/N; or 108A/L, 108B/M, and 143
Chemistry 151A/L, 163A, 163B, 163C
Biochemistry and Molecular Biology 100A, 100B,
100C, 110
Biology 20A, 20B, 20L
Comprehensive Requirement:
same as for the B.A.
(see above)
The following is the recommended academic plan for students
to complete during their first two years as preparation for the
B.S. degree.
|
Year
|
Fall
|
Winter
|
Spring
|
|
1st
(frsh)
|
Math 19A
Chem 1B/M
|
Math 19B
Chem 1C/N
|
Math 22
|
|
2nd
(soph)
|
Chem 112A/L or
Chem 108A/L
Phys 6A/L
|
Chem 112B/M or
Chem 108B/M or
Chem 108B/L
Phys 6B/M
|
Chem 112C/N
Chem 108B/M
Phys 6C/N
|
A concentration within the biology, chemistry, and Earth
sciences degree programs, collectively identified as the environmental
sciences program, is offered. Students will develop a core competence
suitable for pursuing graduate work in the environmental chemistry
area or in graduate environmental sciences programs.
Lower-Division Requirements:
Biology 20A and 20B
Chemistry 1B/M and 1C/N
Earth Sciences 20/L, 10/L, or 5/L
Environmental Studies 25
Mathematics 11A-B and 22; or 19A-B and 22
Physics 5A/L, 5B/M, and 5C/N; or 6A/L, 6B/M,
and 6C/N
Upper-Division Requirements:
Biology/Environmental Toxicology 134, Comparative Toxicology
Chemistry 103, Biochemical Structures, Reactions, and Energetics
Chemistry 108A/L, 108B/M, Organic Chemistry
Chemistry 122, Principles of Instrumental Analysis
Chemistry 151A/L, Chemistry of Metals/Inorganic Lab
Chemistry 163A, Quantum Mechanics and Basic Spectroscopy;
and 163B, Thermodynamics and Kinetic Theory; and 146A or
146B or 146C, Advanced
Laboratory
Earth Sciences 110B/M, Earth as a Chemical System/Laboratory
Ocean Sciences 120, Aquatic Chemistry: Principles and
Applications; or 220, Chemical Oceanography
Comprehensive Requirement (choose one of the
following):
Senior thesis: 180A, 180B, 180C, Senior Research
Senior essay: 199, Tutorial
The following is the recommended academic plan for students
who wish to pursue the environmental chemistry concentration.
|
Year
|
Fall
|
Winter
|
Spring
|
|
1st
(frsh)
|
Chem 1B/M
Math 11A or 19A
college core
|
Chem 1C/N
Math 11B or 19B
Biol 20A
|
gen ed
Math 22
Biol 20B
|
|
2nd
(soph)
|
Chem 108A/L
Phys 6A/L
gen ed
|
Chem 108B/M
Phys 6B/M
Envs 25
|
Eart 10/L
Phys 6C/N
|
|
3rd
(jr)
|
Chem 163A
Chem 122
gen ed
|
Eart 110B/M
Chem 163B
|
Chem 151A/L
Biol 134
gen ed
|
|
4th
(sr)
|
Chem 164A
gen ed
|
Chem 164B
Chem 103
gen ed
|
Chem 146A/B/C
Ocea 220
gen ed
|
Senior Research (courses 180A-B-C)
offers an opportunity to participate in the process whereby knowledge
is discovered; it is recommended to students, regardless of their
ultimate career interest. Students should note, however, that the
time demands of Senior Research are greater than those of
the usual course.
The course requirements for the minor, including electives,
are the same as for the B.A. degree, with the exclusion of courses
151A/151L, 164A, 164B, 146A, 146B, 146C, and 146D. The minor has
no senior comprehensive requirement.
The chemistry and biochemistry adviser provides counsel
to undergraduate majors. Students are encouraged to pick up a declaration
of major form at their college office and declare their major at
an early date so that advising and planning can commence. To assist
with this advising, the Chemistry and Biochemistry Department has
prepared a curriculum guide. Copies are available at the office.
Students who wish to obtain permission to take a course
without having completed the listed prerequisites must make prior
arrangements with the instructor. Courses are designed for students
who have met all the prerequisites; those who have not are at a
disadvantage.
Prospective chemistry majors are encouraged to get a solid
foundation in high school mathematics; familiarity with algebra,
logarithms, trigonometry, and analytic geometry is particularly
recommended. High school study of chemistry is not necessary in
order to major in chemistry. Students without high school chemistry
start their program with course 1A, whereas those with some preparation
start in courses 1B and 1M. Experience shows that starting with
course 1A does not cause any impediment to progress in the major.
The Chemistry and Biochemistry Department encourages the
admission of students from community colleges. Students who intend
to transfer from other institutions, particularly community colleges,
are urged to develop a strong background in general chemistry, organic
chemistry, calculus, and physics. If the institution offers a physics
course based on calculus as well as a non-
calculus-based course, the student should take the calculus-based
course. Prospective transfer students should consult with a community
college adviser regarding details of course transferability, and
soon after arrival at UC Santa Cruz, they should meet with a UCSC
adviser in order to clarify their transfer credit status.
Students intending to enter medical, dental, or another
health science professional school can satisfy entrance requirements
with a major program in chemistry supplemented with further courses,
especially in biology, as specified by the particular school. Students
are urged to contact the Health Sciences Career Advising Office.
A brochure about preparing for careers in the health sciences is
available from that office on request.
See the Biochemistry and Molecular Biology
section for program description and major requirements.
The American Chemical Society (ACS) recognizes certain
undergraduate programs, including those of UC Santa Cruz, to be
of such quality as to entitle graduates to become ACS members immediately
upon graduation. Graduates must be individually certified to the
ACS by the Chemistry and Biochemistry Department chair if they have
satisfactorily completed an approved program of study. ACS certification
standards are rigorous; a graduate who has met them carries a distinction
that is well recognized in the profession. Broadly speaking, ACS
certification requirements are satisfied by completing a B.S. major
program at UC Santa Cruz, including course 122 as an elective. A
year of study in a major modern foreign language (preferably German)
is recommended. More information is available from the chemistry
undergraduate adviser.
With most of the 80 currently enrolled students engaged
in doctoral research, the Chemistry and Biochemistry Department
offers three graduate degrees: the Ph.D., a thesis M.S., and a course
work M.S. The Ph.D. and thesis M.S. programs are designed to help
students develop into independent scholars while pursuing the excitement
of scientific research in a personal, supportive environment. Both
the Ph.D. and the research M.S. programs prepare students for careers
in academia, industry, government laboratories, and other settings
requiring an advanced education in chemistry and related disciplines.
The course work M.S. does not require research and is suited to
teachers and those wishing to update or broaden their chemical expertise.
Within the Ph.D. program, students have the flexibility to design
a course of study focused on personal research interests and are
also expected to maintain the high intellectual standards associated
with the doctoral degree. Research options include biochemistry,
biophysical chemistry, bioinorganic chemistry, organic/bioorganic
chemistry, and physical chemistry. Collaborative research is encouraged,
both intra- and inter-departmentally. The interdisciplinary Center
for Biomolecular Science and Engineering emphasizes bioinformatics,
nanotechnology, and computational approaches to chemistry. Biochemists
join geneticists, computer scientists, and biologists in the Center
for the Molecular Biology of RNA. Productive interactions have also
developed between Chemistry and Biochemistry and Environmental Toxicology;
Molecular, Cell, and Developmental Biology; and the School of Engineering.
Ph.D. requirements include a minimum of six lecture courses, a
seminar presentation, an oral examination, original lab research,
a dissertation, and dissertation seminar.
Before beginning course work, Ph.D. students take attainment exams
to confirm their level of preparation in four areas: organic, inorganic,
physical, and biochemistry. First-year students take 292 and 296
and select an adviser and research committee in spring quarter.
In the first two years, students enroll in core and other courses
according to their specialization. Core courses are 200A, 200B,
and 200C for biochemistry and biophysical chemistry; 234 and 256A,
256B, or 256C for inorganic and bioinorganic chemistry; six of the
240 series for organic chemistry; and 261, 262, and 263 for physical
chemistry. Organic students must pass four cumulative exams based
on assigned reading in current research journals. The Ph.D. candidate’s
research committee meets formally with the student to evaluate research
progress at least once a year. Students are expected to finish all
Ph.D. requirements in five to six years.
The research M.S. requires attainment exams, five lecture courses,
292, 296, and original research leading to a thesis. The course
work M.S. requires attainment exams, nine courses including seven
lecture courses from three chemistry subdisciplines, 296, and presentation
of a capstone literature seminar.
M.S. students and Ph.D. students who have not advanced to candidacy
attend a weekly seminar (291A, 291B, 291C, or 291D). Speakers from
UC Santa Cruz, other universities, and research labs expose students
to advances at the frontiers of chemical research offering the opportunity
for personal contact with leading scientists.
Teaching assistantships provide both financial support and the
opportunity to put into practice the required pedagogical training
offered in 296 (presentation techniques, discussion strategies,
lab teaching skills, lab safety procedures, time management). Advanced
doctoral students can also be supported as graduate student researchers.

Chemistry students should be aware of the materials fee
required for some courses. The fee is billed to the student’s account
for specific laboratory materials purchased by the Department of
Chemistry and Biochemistry through the university. Fees generally
range from $20 to $40 per course. Students may incur additional
expense purchasing individual supplies.
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